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undergraduate thesis
Vizualizacija podataka dobivenih sekvenciranjem RNA
Zagreb: University of Zagreb, Faculty of Electrical Engineering and Computing, 2020. urn:nbn:hr:168:675476
Vrlec, Jan
University of Zagreb
Faculty of Electrical Engineering and Computing

Institutional repository: FER Repository

Cite this document

Vrlec, J. (2020). Vizualizacija podataka dobivenih sekvenciranjem RNA (Undergraduate thesis). Zagreb: University of Zagreb, Faculty of Electrical Engineering and Computing. Retrieved from https://urn.nsk.hr/urn:nbn:hr:168:675476

Vrlec, Jan. "Vizualizacija podataka dobivenih sekvenciranjem RNA." Undergraduate thesis, University of Zagreb, Faculty of Electrical Engineering and Computing, 2020. https://urn.nsk.hr/urn:nbn:hr:168:675476

Vrlec, Jan. "Vizualizacija podataka dobivenih sekvenciranjem RNA." Undergraduate thesis, University of Zagreb, Faculty of Electrical Engineering and Computing, 2020. https://urn.nsk.hr/urn:nbn:hr:168:675476

Vrlec, J. (2020). 'Vizualizacija podataka dobivenih sekvenciranjem RNA', Undergraduate thesis, University of Zagreb, Faculty of Electrical Engineering and Computing, accessed 16 June 2024, https://urn.nsk.hr/urn:nbn:hr:168:675476

Vrlec J. Vizualizacija podataka dobivenih sekvenciranjem RNA [Undergraduate thesis]. Zagreb: University of Zagreb, Faculty of Electrical Engineering and Computing; 2020 [cited 2024 June 16] Available at: https://urn.nsk.hr/urn:nbn:hr:168:675476

J. Vrlec, "Vizualizacija podataka dobivenih sekvenciranjem RNA", Undergraduate thesis, University of Zagreb, Faculty of Electrical Engineering and Computing, Zagreb, 2020. Available at: https://urn.nsk.hr/urn:nbn:hr:168:675476

Metadata
TitleVizualizacija podataka dobivenih sekvenciranjem RNA
Title (english)RNA Sequencing Data Visualisation
AuthorJan Vrlec
MentorKrešimir Križanović (mentor)
Committee memberKrešimir Križanović (predsjednik povjerenstva)
Committee memberMile Šikić (član povjerenstva)
Committee memberJosip Marić (član povjerenstva)
GranterUniversity of Zagreb
Faculty of Electrical Engineering and Computing
Zagreb
Defense date and country2020-08-24, Croatia
Scientific / art field,
discipline and subdiscipline		TECHNICAL SCIENCES
Computing
Abstract
Ovaj rad sadrži osnovnu bioinformatičku pozadinu elemenata i procesa koji su povezani sa sekvenciranjem RNA. Nadalje, govori se o samom procesu sekvenciranja i procesima mapiranja i poravnanja koji slijede nakon sekvenciranja. Obrađuju se tipovi datoteka koji su dobiveni uz pomoć navedenih procesa. Za svaki tip se objašnjava format datoteke i što podatci unutar nje predstavljaju. Spominju se alati Mininap2 i Samtools koji služe za rad s navedenim datotekama. Na kraju se govori o razvijenoj aplikaciji. Spominju se opće informacije vezane za razvoj aplikacije. Slikama se prikazuje izgled aplikacije, kao i njeni elementi. Svaki element je još dodatno opisan.
Abstract (english)
This paper contains the basic bioinformatic background of elements and processes associated with RNA sequencing. Furthermore, it talks about the sequencing process itself and the processes of mapping and alignment that follow. The information about file types obtained using the aforementioned processes are also contained in this paper. For each file type, the file format and the representation of data within it is explained. Mention is made of the Minimap2 and Samtools tools used to work with the specified files. Lastly, the paper contains information about the developed application. General information related to the development of the application is mentioned. The appearance of the application is shown, as well as it's elements. Each element is further described.
Keywords
Keywords (english)
Languagecroatian
URN:NBNurn:nbn:hr:168:675476
Study programmeTitle: Computing
Study programme type: university
Study level: undergraduate
Academic / professional title: sveučilišni/a prvostupnik/ prvostupnica (baccalaureus/baccalaurea) inženjer/inženjerka računarstva (sveučilišni/a prvostupnik/ prvostupnica (baccalaureus/baccalaurea) inženjer/inženjerka računarstva)
Type of resourceText
File originBorn digital
Access conditionsClosed access
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Created on2023-01-13 14:14:05