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undergraduate thesis
Raspodijeljeno de novo sastavljanje genoma na platformi Apache Spark
Zagreb: University of Zagreb, Faculty of Electrical Engineering and Computing, 2021. urn:nbn:hr:168:232719
Džaja, Mirko
University of Zagreb
Faculty of Electrical Engineering and Computing

Institutional repository: FER Repository

Cite this document

Džaja, M. (2021). Raspodijeljeno de novo sastavljanje genoma na platformi Apache Spark (Undergraduate thesis). Zagreb: University of Zagreb, Faculty of Electrical Engineering and Computing. Retrieved from https://urn.nsk.hr/urn:nbn:hr:168:232719

Džaja, Mirko. "Raspodijeljeno de novo sastavljanje genoma na platformi Apache Spark." Undergraduate thesis, University of Zagreb, Faculty of Electrical Engineering and Computing, 2021. https://urn.nsk.hr/urn:nbn:hr:168:232719

Džaja, Mirko. "Raspodijeljeno de novo sastavljanje genoma na platformi Apache Spark." Undergraduate thesis, University of Zagreb, Faculty of Electrical Engineering and Computing, 2021. https://urn.nsk.hr/urn:nbn:hr:168:232719

Džaja, M. (2021). 'Raspodijeljeno de novo sastavljanje genoma na platformi Apache Spark', Undergraduate thesis, University of Zagreb, Faculty of Electrical Engineering and Computing, accessed 02 July 2024, https://urn.nsk.hr/urn:nbn:hr:168:232719

Džaja M. Raspodijeljeno de novo sastavljanje genoma na platformi Apache Spark [Undergraduate thesis]. Zagreb: University of Zagreb, Faculty of Electrical Engineering and Computing; 2021 [cited 2024 July 02] Available at: https://urn.nsk.hr/urn:nbn:hr:168:232719

M. Džaja, "Raspodijeljeno de novo sastavljanje genoma na platformi Apache Spark", Undergraduate thesis, University of Zagreb, Faculty of Electrical Engineering and Computing, Zagreb, 2021. Available at: https://urn.nsk.hr/urn:nbn:hr:168:232719

Metadata
TitleRaspodijeljeno de novo sastavljanje genoma na platformi Apache Spark
Title (english)Distributed De Novo Genome Assembly on Apache Spark
AuthorMirko Džaja
MentorKrešimir Pripužić (mentor)
Committee memberKrešimir Pripužić (predsjednik povjerenstva)
Committee memberDamjan Katušić (član povjerenstva)
Committee memberJosip Marić (član povjerenstva)
GranterUniversity of Zagreb
Faculty of Electrical Engineering and Computing
Zagreb
Defense date and country2021-07-09, Croatia
Scientific / art field,
discipline and subdiscipline		TECHNICAL SCIENCES
Computing
Abstract
U ovom radu je predstavljeno sastavljanje genoma na raspodijeljenim sustavima. Konkretno, detaljno je opisana platforma Apache Spark koja omogućuje raspodijeljeno izvođenje. Predstavljeno je sastavljanje genoma, dvije tehnike od kojih smo se odlučili za de novo da je pobliže opišemo. Uspoređujući dva de novo algoritma, SORA i SpaRC, došli smo do zaključka da postoji široki spektar različitih algoritama koji imaju različite stupnjeve raspodijeljenosti. Zahvaljujući tome svatko može izabrati koji će algoritam koristiti u svojim istraživanjima, a to prvenstveno ovisi o dostupnim računalnim resursima.
Abstract (english)
Within this paper, it is presented genome assembly on distributed system. Specifically, there is detailed description of Apache Spark which enables distributed performing of jobs. It is presented genome assembly, two technics of which we decided to closely describe de novo technic. Two algorithms were compared, SORA and SpaRC, and we concluded that there are a wide range of different algorithms that have different degrees of distribution. Thanks to that everybody can choose which algorithm to use in their research, and this primarily depends on the available computer resources.
Keywords
Keywords (english)
Languagecroatian
URN:NBNurn:nbn:hr:168:232719
Study programmeTitle: Computing
Study programme type: university
Study level: undergraduate
Academic / professional title: sveučilišni/a prvostupnik/ prvostupnica (baccalaureus/baccalaurea) inženjer/inženjerka računarstva (sveučilišni/a prvostupnik/ prvostupnica (baccalaureus/baccalaurea) inženjer/inženjerka računarstva)
Type of resourceText
File originBorn digital
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Created on2023-01-14 20:21:36