prikaz prve stranice dokumenta Precise identification of cascading alpha satellite higher order repeats in T2TCHM13 assembly of human chromosome 3
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Precise identification of cascading alpha satellite higher order repeats in T2TCHM13 assembly of human chromosome 3
Croatian Medical Journal, 65 (2024); 209. urn:nbn:hr:217:903234
Glunčić, Matko; Vlahović, Ines; Rosandić, Marija; Paar, Vladimir

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Institucijski repozitorij: Repozitorij Prirodoslovno-matematičkog fakulteta

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Glunčić, M., Vlahović, I., Rosandić, M. i Paar, V. (2024). Precise identification of cascading alpha satellite higher order repeats in T2TCHM13 assembly of human chromosome 3. Croatian Medical Journal, 65.. Preuzeto s https://urn.nsk.hr/urn:nbn:hr:217:903234

Glunčić, Matko, et al. "Precise identification of cascading alpha satellite higher order repeats in T2TCHM13 assembly of human chromosome 3." Croatian Medical Journal, vol. 65, 2024. https://urn.nsk.hr/urn:nbn:hr:217:903234

Glunčić, Matko, Ines Vlahović, Marija Rosandić i Vladimir Paar. "Precise identification of cascading alpha satellite higher order repeats in T2TCHM13 assembly of human chromosome 3." Croatian Medical Journal 65 (2024). https://urn.nsk.hr/urn:nbn:hr:217:903234

Glunčić, M., et al. (2024) 'Precise identification of cascading alpha satellite higher order repeats in T2TCHM13 assembly of human chromosome 3', Croatian Medical Journal, 65. Preuzeto s: https://urn.nsk.hr/urn:nbn:hr:217:903234 (Datum pristupa: 04.11.2024.)

Glunčić M, Vlahović I, Rosandić M, Paar V. Precise identification of cascading alpha satellite higher order repeats in T2TCHM13 assembly of human chromosome 3. Croatian Medical Journal [Internet]. 2024. [pristupljeno 04.11.2024.];65. Dostupno na: https://urn.nsk.hr/urn:nbn:hr:217:903234

M. Glunčić, I. Vlahović, M. Rosandić i V. Paar, "Precise identification of cascading alpha satellite higher order repeats in T2TCHM13 assembly of human chromosome 3", Croatian Medical Journal, vol. 65, 2024. [Online]. Dostupno na: https://urn.nsk.hr/urn:nbn:hr:217:903234. [Citirano: 04.11.2024.]

Za citiranje koristite ovu mrežnu adresu: https://urn.nsk.hr/urn:nbn:hr:217:903234
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Naslov (engleski)Precise identification of cascading alpha satellite higher order repeats in T2TCHM13 assembly of human chromosome 3
AutorMatko Glunčić
AutorInes Vlahović
AutorMarija Rosandić
AutorVladimir Paar
Autorova ustanovaSveučilište u Zagrebu
Prirodoslovno-matematički fakultet
(Fizički odsjek)
Znanstveno / umjetničko
područje, polje i grana		PRIRODNE ZNANOSTI
Fizika
Sažetak (engleski)
Aim. To precisely identify and analyze alpha-satellite higher-order repeats (HORs) in T2T-CHM13 assembly of human chromosome 3. Methods. From the recently sequenced complete T2TCHM13 assembly of human chromosome 3, the precise alpha satellite HOR structure was computed by using the novel high-precision GRM2023 algorithm with global repeat map (GRM) and monomer distance (MD) diagrams. Results. The major alpha satellite HOR array in chromosome 3 revealed a novel cascading HOR, housing 17mer HOR copies with subfragments of periods 15 and 2. Within each row in the cascading HOR, the monomers were of different types, but different rows within the same cascading 17mer HOR contained more than one monomer of the same type. Each canonical 17mer HOR copy comprised 17 monomers belonging to 16 different monomer types. Another pronounced 10mer HOR array was of the regular Willard’s type. Conclusion. Our findings emphasize the complexity within the chromosome 3 centromere as well as deviations from expected highly regular patterns.
Ključne riječi (engleski)
Jezikengleski
Vrsta publikacijeZnanstveni rad - Rad s konferencije
Status objaveObjavljen
Vrsta recenzijeRecenziran - međunarodna recenzija
Verzija publikacijeObjavljena verzija rada (izdavačev PDF)
Naslov časopisaCroatian Medical Journal
Brojčani podacivol. 65, 209
p-ISSN0353-9504
e-ISSN1332-8166
URN:NBNurn:nbn:hr:217:903234
Datum objave publikacije2024
ProjektŠifra: KK.01.1.1.01.0004
Naziv (hrvatski): Provedba vrhunskih istraživanja u sklopu Znanstvenog centra izvrsnosti za kvantne i kompleksne sustave te reprezentacije Liejevih algebri
Naziv (engleski): Implementation of top research within the Scientific Center of Excellence for Quantum and Complex Systems, and Representations of Lie Algebras
Kratica: QuantiXLie
Voditelj: Hrvoje Buljan
Pravna nadležnost: eu
Financijer: Europska komisija
Linija financiranja: European Regional Development Fund
ProjektŠifra: IP-2019-04-2757
Naziv (hrvatski): Varijante u repetitivnim strukturama višeg reda u centromernim i NBPF dijelovima genoma čovjeka i viših primata
Naziv (engleski): Variants in higher order repeat structures in centromeric and NBPF regions of human and higher primates genomes
Kratica: HORVAR
Voditelj: Matko Glunčić
Pravna nadležnost: Hrvatska
Financijer: Hrvatska zaklada za znanost
Linija financiranja: Research Projects
SkupNaziv: 13th International Society for Applied Biological Sciences
Kratica: ISABS
Lokacija: Split, Hrvatska
Datum početka: 2024-06-17
Datum završetka: 2024-06-22
URL dokumentahttp://www.cmj.hr/2024/65/3/38868967.htm
Vrsta resursaTekst
Prava pristupaOtvoreni pristup
Uvjeti korištenjaIkona licence Imenovanje-Nekomercijalno-Bez prerada 4.0 međunarodna (CC BY-NC-ND 4.0)
Javna napomenaReceived: April 10, 2024. Accepted: May 28, 2024.
Datum i vrijeme pohrane2024-07-23 20:53:57